CompactionAnalyzer

Measure fiber orientation

Example

Fibers around a cell

Relative to a cell Fibers relative to image axes

Fibers relative to image axes

Relative to X and Y Fibers around a chosen point

Fibers around a chosen point

Relative to a point Fibers along a chosen line

Fibers along a chosen line

Relative to a line

Orientation imageDrop image or browse

Cell imageChoose image

Tensor window σ (px)

Pixel size (µm/px)

Mask threshold

More settings

Edge crop (px)

Image smoothing σ (px)

Mask smoothing σ (px)

Cell smoothing σ (px)

Background smoothing σ (px)

Invert segmentation

TIFF, PNG or JPEGLoading analysis engine…

Image

Load an image or try an example.

Results

Analyze to see angle, alignment and coherency.